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Tayside Pathology
Description
Tayside Pathology containing details from pathological samples and biopsy including diagnosis codes. This data originates from Ninewells Pathmanager.
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Technical information
A JSON file is available with further technical information. This can include details of variables and data classes contained in the dataset.
Preview of JSON file
[{"id": "", "description": "Pathology Data from Ninewells Pathmanager. Data covers legacy 1992 until present. Routine updates data received qtrly. However, these are 12months behind real-time. The delay is because further tests and analysis can be requested on a sample, these are generally made withn 12mths of the original sample date. The 12mnths delay reduces the risk that a sample is used in a project, that is subsequently changed/updated.", "name": "Pathology (Tayside)", "dataElementsCount": 11, "dataElements": [{"id": "", "description": "A code that identifies the department. Separate departments in Ninewells (NS \u2013 Ninewells Surgical, NC \u2013 Ninewells Cytology, PS \u2013 PRI Surgical and PC \u2013 PRI Cytology) until they combined in 2005 when the PS and PC codes were retired..", "name": "DepartmentCode", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the anonymised specimen number.", "name": "ANOSpecimenNumber", "type": "PrimitiveType"}, {"id": "", "description": "Anonymised patient identifier", "name": "PROCHI", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the date of the procedure that produced the specimen.", "name": "DateofSpecimen", "type": "PrimitiveType"}, {"id": "", "description": "This field up until the beginning of 2016, reflected the date that the request was booked into the LIMS. From 2016 onwards, it is the date that the request was received in the department..", "name": "DateofReceipt", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the date that the request is booked into the LIMS. Up until the end of 2015, this field will be identical to the Date Received field. From the beginning of 2016, it may differ..", "name": "DateBookedIn", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the date of the first authorisation of a report for the request.", "name": "DateAuthorised", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the date of the most recent authorisation of a report for the request. In the majority of the cases, this will be identical to the date authorised. Where the date differs, it is most likely to be caused by the production of a supplementary report with more information, very occasionally because the report has been amended to correct or clarify information, or sometimes for administration purposes and there will be no obvious change to the data.", "name": "DateLastAuthorised", "type": "PrimitiveType"}, {"id": "", "description": "The specimens field has an entry for each request can comprise a number of specimens. This field contains the codes of each of the specimens based on our attempt to best describe the tissue sent in..", "name": "AllSpecimenTypeCodes", "type": "PrimitiveType"}, {"id": "", "description": "SNOMED codes applied by the pathologist to best describe the tissue (T code) and diagnosis (M code usually but can be a D, E or F code) within the limits of the system. The SNOMED version that we have been using up to date is SNOMED II which is a rather old system and is likely to be replaced soon..", "name": "AllDiagnosisCodes", "type": "PrimitiveType"}, {"id": "", "description": "This field represents the test results in # seperated form.", "name": "ResultTextLarge", "type": "PrimitiveType"}]}]
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Additional information
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DocumentationDocumentation
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LanguageEnglish
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Geographic AreaScotland
Related resources
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Requesting access to this data
This is a secure dataset that can only be accessed by researchers from approved organisations.
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PublisherNHS Tayside
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Contacthicsupport@dundee.ac.uk
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Key Details
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Activity that generated the datasetNo information available
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Conforms toNo information available
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CreatorChris Wood
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DocumentationNo information available
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End time period of data covered by this datasetNo information available
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Formal release or publication date2023-11-08
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Geographic AreaUnited Kingdom,Scotland,Tayside Region
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Landing page
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LanguageEnglish
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ProvenanceNo information available
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Start time period of data covered by this dataset1992-02-01
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The dataset typedataset
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Theme/categoryNo information available
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Update frequencyirregular
Versions and updates
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A description of the differences between this version and a previous version of the datasetNo information available
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The most recent data on which the dataset was changed or modifiedNo information available
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VersionNo information available
Further details
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A related dataset from which this dataset is derivedNo information available
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Other identifiersNo information available
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Qualified attributionNo information available
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Qualified relationNo information available
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Sample distribution of the datasetNo information available
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The minimum spacial separation resolvable in the dataset, measured in metersNo information available
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The minimum time period resolvable in the datasetNo information available